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FASTQ

FastQPress allows both reference-free and reference-based compression.

Reference-free compression​

fastqpress --compress -rf my_file.fq.gz

Reference-based compression​

fastqpress --compress -rb my_file.fq.gz

Multiple files compression​


fastqpress --compress -m my_file1.fq.gz my_file2.fq.gz my_file3.fq.gz

Decompression​

fastqpress --decompress my_file.fqpress