FASTA
FastQPress allows both reference-free and reference-based compression.
Reference-free compression
fastqpress --compress -rf my_file.fasta.gz
Reference-based compression
fastqpress --compress -rb my_file.fasta.gz
Multiple files compression
fastqpress --compress -m my_file1.fasta.gz my_file2.fasta.gz my_file3.fasta.gz
Decompression
fastqpress --decompress my_file.fqpress